{"id":1310,"date":"2021-08-01T16:56:23","date_gmt":"2021-08-01T20:56:23","guid":{"rendered":"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/?page_id=1310"},"modified":"2022-08-11T20:17:54","modified_gmt":"2022-08-12T00:17:54","slug":"lecture-slides","status":"publish","type":"page","link":"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/lecture-slides\/","title":{"rendered":"Lecture slides"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/07\/Jonides_Intro-lecture-2022-early-posting.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">Neuroanatomy &amp; Experimental Design presentation by John Jonides, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/1_MRI_Physics_Lec1.pdf\">MRI Physics: MRI Basics presentation by  Nicole Seiberlich, University of Michigan <\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/2_MRI_Physics_T1Relax_T2Relax.pdf\">MRI Physics:  T1 Relaxation presentation by Nicole Seiberlich, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/3_MRI_Physics_DataAcq_Contrast.pdf\">MRI Physics: Data Acquisition and Echoes presentation by Nicole Seiberlich, University of Michigan<\/a> <\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/MRI_Physics_Lec2_MagFieldGrads.pdf\" data-type=\"URL\" data-id=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/MRI_Physics_Lec2_MagFieldGrads.pdf\">MRI Physics: Magnetic Field Gradients presentation by Nicole Seiberlich, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/MRI_Physics_Resolution.FoV_.SpatialEncoding.pdf\">MRI Physics:  Resolution, FoV, Spatial Encoding presentation by Nicole Seiberlich, University of Michigan <\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/MRI_Physics_Lec2_AdvImagTopics.pdf\" data-type=\"URL\" data-id=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/MRI_Physics_Lec2_AdvImagTopics.pdf\"> MRI Physics:  Advanced Topics presentation by Nicole Seiberlich, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/BOLD_slides_22.pdf\">The BOLD Response presentation by Doug Noll, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/mri_hardware_22.pdf\">MRI Hardware &amp; Safety presentation by Doug Noll, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/Hampstead_fMRI-Applied-to-Clinical-Populations.pdf\">Clinical Applications of fMRI-virtual presentation by Benjamin Hampstead, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/Artefacts_lecture2022.pdf\">fMRI Preprocessing and Artefacts presentation by Luis Hernandez-Garcia, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/Peltier-SPM-Slides.pdf\">SPM Introduction presentation by Scott Peltier, University of <\/a><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/peltier_spm_intro_slides_2022.ppt\">Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/AJahn_Day5_1stLevelAnalysis.pdf\" data-type=\"URL\" data-id=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/AJahn_Day5_1stLevelAnalysis.pdf\">1st Level Analysis  presentation by Andy Jahn, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\">Review of Basic Statistics and the GLM-presentation by Adriene Beltz, University of Michigan (If you attended the course, an email was sent with the slides attached. Contact mohrbach@umich.edu for a PDF copy of the slides if you did not receive.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/Jahn_2ndLevelAnalysis.pdf\">Design Optimization and 2nd Level Analysis presentation by Andy Jahn, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\">Pattern Analysis &amp; Classification via MVPA-virtual but live presentation by Stephen LaConte,  Virginia Tech (Zoom presentation).  Available under Lecture Recordings.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/Jahn_Day9_Pitfalls.pdf\" data-type=\"URL\" data-id=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/Jahn_Day9_Pitfalls.pdf\">Pitfalls in fMRI Research presentation by Andy Jahn, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/ADIordan_NetworkAnalysis.pdf\">Network Analysis by Alexandru Iordan, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/ADIordan_TaskConnectivity.pdf\">Task Connectivity by Alexandru Iordan, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/peltier_wed_conn_intro.pdf\" data-type=\"URL\" data-id=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/peltier_wed_conn_intro.pdf\">Connectivity Intro by Scott Peltier, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/peltier_wednesday_connectivity_2022-1.pdf\">Investigations in Resting State Connectivity by Scott Peltier, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/Jahn_Day11_BIDS.pdf\">Introduction to Open Science &amp; BIDS by Andy Jahn, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/peltier_bids_thursday.pdf\">UM fMRI Lab Data: BIDS Conversion by Krisanne Litinas, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/fmriprep_sample_output.pdf\">fMRI Prep, Sample Output by Scott Peltier, University of Michigan<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/courses.lsa.umich.edu\/fmri-training-course\/wp-content\/uploads\/sites\/17\/2022\/08\/Day12_Reproducibility.pdf\">Reproducibility by Andy Jahn, University of Michigan<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Neuroanatomy &amp; Experimental Design presentation by John Jonides, University of Michigan MRI Physics: MRI Basics presentation by Nicole Seiberlich, University of Michigan MRI Physics: T1 Relaxation presentation by Nicole Seiberlich, University of Michigan MRI Physics: Data Acquisition and Echoes presentation by Nicole Seiberlich, University of Michigan MRI Physics: Magnetic Field Gradients presentation by Nicole Seiberlich, [&hellip;]<\/p>\n","protected":false},"author":54,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"site-sidebar-layout":"default","site-content-layout":"","ast-site-content-layout":"default","site-content-style":"default","site-sidebar-style":"default","ast-global-header-display":"","ast-banner-title-visibility":"","ast-main-header-display":"","ast-hfb-above-header-display":"","ast-hfb-below-header-display":"","ast-hfb-mobile-header-display":"","site-post-title":"","ast-breadcrumbs-content":"","ast-featured-img":"","footer-sml-layout":"","ast-disable-related-posts":"","theme-transparent-header-meta":"","adv-header-id-meta":"","stick-header-meta":"","header-above-stick-meta":"","header-main-stick-meta":"","header-below-stick-meta":"","astra-migrate-meta-layouts":"default","ast-page-background-enabled":"default","ast-page-background-meta":{"desktop":{"background-color":"","background-image":"","background-repeat":"repeat","background-position":"center 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